Usability of Containers: A Scientific Workflow

1.download_data.sh ...
2.simulate_reads.sh ...
3.generate_transcrip...
4.quantify_transcrip...
5.bwa_index.sh ...
6.bwa_align.sh ...
7.prepare_rtg_run.sh...
8.map_trio.sh ...
9.family_call_varian...
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CONTEXT_SWITCHES
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
CPU_SECONDS_USED
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
ELAPSED_TIME_SEC
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
FS_OUTPUTS
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
MAX_RES_SIZE_KB
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
PERC_CPU_ALLOCATED
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