Nov 28, 2017 — Reproducibie Impossible — Is reproducibility possible? This effort to “freeze everything so we can do it again” exactly the same mirrors the way that science is practiced, and not the natural world. Let me explain. Let’s start with asking how we understand data.... Read more

Nov 19, 2017 — The Experiment Factory (v2.0) Beta — Nobody ever goes in… and nobody ever comes out. I’m excited to share more progress on the now beta version of The Experiment Factory, with the following updates: support for postgresql, sqlite, and mysql in addition to the default filesystem... Read more

Nov 7, 2017 — The Experiment Factory (v2.0) Alpha — Nobody ever goes in… and nobody ever comes out. I’m pleased to share that I’ve been working on a new alpha version of The Experiment Factory, completely redone to deploy “Reproducible Experiment Containers.” It’s a beautiful combination of Singularity’s new... Read more

Nov 2, 2017 — Adding Container Labels Dynamically — Here is a quick snippet for how to dynamically add labels to your Singularity Container at build time, which are then exposed when you inspect it. First, here is the recipe: We are basically copying the Python helpers from Singularity... Read more